This is our Biocomputing Toolkit.
Function: A precision medical research method based on deep cascade centroid classifier is an integrated learning method with cascade structure, which can perform representation learning. It can be applied to early diagnosis, prognosis and drug sensitivity prediction of cancer.
https://github.com/xiexiexiekuan/DeepCentroid
Paper: Lu Bo, Xiong-Hui Zhou*. Ensemble Classifier based on gene synergistic network improves breast cancer outcome prediction. IEEE International Conference on Bioinformatics and Biomedicine (BIBM). 2019; 207-210.
Function: Using gene expression data and matched clinical data od cancer patients, construct gene synergistic networks.
https://github.com/lubo1220/Ensemble-Classifier-based-on-gene-synergistic-network.git
Here you can download various data and published software packages of the laboratory.